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Domain 1 : The Past and the Future
Domain 2 : Molecular Architecture and Composition of Cells
Domain 3 : Metabolism and Metabolic Fluxes
Domain 4 : Synthesis of Polymers and Assembly
Domain 5 : Regulation and Physiology
Domain 6 : Chromosomes, Genomics, and Evolution
Domain 7 : Genetics
Domain 8 : Environmental Ecology and Molecular Pathogenesis
Domain 9 : Biotechnology
Domain 10 : Bioinformatics and Systems Biology
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EcoSal location: Table of Contents
Domain 3 : Metabolism and Metabolic Fluxes
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Domain 1
Escherichia coli
and the Emergence of Molecular Biology
(AGNES ULLMANN) (06-10-2011)
Domain 5
Stationary-Phase Gene Regulation in
Escherichia coli
?
(REGINE HENGGE) (12-16-2011)
Domain 7
Translesion DNA Synthesis
(ALEXANDRA VAISMAN, JOHN P. M
C
DONALD, AND ROGER WOODGATE) (03-19-2012)
Stress-Induced Mutagenesis
(ASHLEY B. WILLIAMS AND PATRICIA L. FOSTER) (03-12-2012)
Homologous Recombination-Experimental Systems, Analysis, and Significance
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Domain 3 : Metabolism and Metabolic Fluxes
Executive Editor
August Böck, University of Munich
Section Editors
Tadhg P. Begley, Cornell University; Georges N. Cohen, Institute Pasteur (Emeritus); John E. Cronan, Jr., University of Illinois; Jeremiah Hanes, Cornell University; G. Wesley Hatfield, University of California, Irvine; John Ingraham, University of California, Davis (Emeritus); Peter Maloney, Johns Hopkins Medical School; Frederick C. Neidhardt, Professor Emeritus, University of Michigan Medical School; Valley Stewart, University of California
Chapters
Introduction
Introduction and Perspectives
UWE SAUER
Energy Generation/Redox Control
The Aerobic and Anaerobic Respiratory Chain of
Escherichia coli
and
Salmonella enterica
: Enzymes and Energetics
GOTTFRIED UNDEN AND PIA DÜNNWALD
ATP Synthesis by Oxidative Phosphorylation
STEVEN B. VIK
NADH as Donor
THORSTEN FRIEDRICH AND THOMAS POHL
Respiration of Nitrate and Nitrite
JEFFREY A. COLE AND DAVID J. RICHARDSON
Succinate as Donor; Fumarate as Acceptor
THOMAS M. TOMASIAK, GARY CECCHINI, AND TINA M. IVERSON
Oxygen as Acceptor
VITALIY B. BORISOV AND MICHAEL I. VERKHOVSKY
S- and N-Oxide Reductases
VICTOR W. T. CHENG AND JOEL H. WEINER
Solute and Ion Transport
Solute and Ion Transport: Outer Membrane Pores and Receptors
SATOSHI YAMASHITA AND SUSAN K. BUCHANAN
Bacterial Ion Channels
EMMA L. R. COMPTON AND JOSEPH A. MINDELL
Ammonia Transport
NED S. WINGREEN
Binding Protein-Dependent Uptake of Maltose into Cells via an ATP-Binding Cassette Transporter
AMY L. DAVIDSON AND FRANCES JOAN D. ALVAREZ
Pathways to Central Metabolism: Catabolism
Hexose/Pentose and Hexitol/Pentitol Metabolism
CHRISTOPH MAYER AND WINFRIED BOOS
Catabolism of Hexuronides, Hexuronates, Aldonates, and Aldarates
M.-A. Mandrand-Berthelot, G. Condemine, and N. Hugouvieux-Cotte-Pattat
Glycerol and Methylglyoxal Metabolism
IAN R. BOOTH
Two-Carbon Compounds and Fatty Acids as Carbon Sources
DAVID P. CLARK AND JOHN E. CRONAN
C
4
-Dicarboxylate Degradation in Aerobic and Anaerobic Growth
Gottfried Unden and Alexandra Kleefeld
Molecular Basis for Bacterial Growth on Citrate or Malonate
P. Dimroth
Catabolism of Amino Acids and Related Compounds
LARRY REITZER
Central Metabolism
Glycolysis and Flux Control
TONY ROMEO AND JACKY L. SNOEP
Tricarboxylic Acid Cycle and Glyoxylate Bypass
JOHN E. CRONAN, JR., AND DAVID L
A
PORTE
Fermentative Pyruvate and Acetyl-Coenzyme A Metabolism
R. Gary Sawers and David P. Clark
Anaerobic Formate and Hydrogen Metabolism
R. GARY SAWERS, MELANIE BLOKESCH, AND AUGUST BÖCK
Biosynthesis
Amino Acid Metabolism and Fluxes
G. WESLEY HATFIELD
Selenocysteine
A. Böck and M. Thanbichler
Selenocysteine Lyase
Thressa C. Stadtman
Selenophosphate Synthetase
Matt D. Wolfe
Regulation of Serine, Glycine, and One-Carbon Biosynthesis
George V. Stauffer
Biosynthesis of Glutamate, Aspartate, Asparagine, l-Alanine, and d-Alanine
Larry Reitzer
Biosynthesis of Proline
LASZLO N. CSONKA AND THOMAS LEISINGER
Biosynthesis and Regulation of the Branched-Chain Amino Acids
KIRSTY A. SALMON, CHIN-RANG YANG, AND G. WESLEY HATFIELD
Regulation of Glutamine Synthetase Activity
EARL R. STADTMAN
Methionine
ELISE R. HONDORP AND ROWENA G. MATTHEWS
Biosynthesis of the Aromatic Amino Acids
JAMES PITTARD AND JI YANG
Biosynthesis of Histidine
MALCOLM E. WINKLER AND SMIRLA RAMOS-MONTAÑEZ
Biosynthesis of Arginine and Polyamines
Daniel Charlier and Nicolas Glansdorff
Biosynthesis of Cysteine
NICHOLAS M. KREDICH
Nucleotides, Nucleosides, and Nucleobases
KAJ FRANK JENSEN, GERT DANDANELL, BJARNE HOVE-JENSEN, AND MARTIN WILLEMOËS
Coenzymes, Cofactors, and Prosthetic Groups
Biosynthesis of Riboflavin
MARKUS FISCHER AND ADELBERT BACHER
Biosynthesis of Menaquinone (Vitamin K
2
) and Ubiquinone (Coenzyme Q)
R. MEGANATHAN AND OHSUK KWON
Biosynthesis of Pantothenic Acid and Coenzyme A
ROBERTA LEONARDI AND SUZANNE JACKOWSKI
Biotin and Lipoic Acid: Synthesis, Attachment, and Regulation
JOHN E. CRONAN
Folate Biosynthesis, Reduction, and Polyglutamylation and the Interconversion of Folate Derivatives
JACALYN M. GREEN AND ROWENA G. MATTHEWS
Biosynthesis of Thiamin Pyrophosphate
CHRISTOPHER T. JURGENSON, STEVEN E. EALICK, AND TADHG P. BEGLEY
Biosynthesis and Use of Cobalamin (B
12
)
JORGE C. ESCALANTE-SEMERENA AND MARTIN J. WARREN
Biogenesis and Homeostasis of Nicotinamide Adenine Dinucleotide Cofactor
ANDREI OSTERMAN
Biosynthesis of Hemes
SAMUEL I. BEALE
Cytochrome c Biogenesis
JULIE M. STEVENS AND STUART J. FERGUSON
Biosynthesis and Insertion of the Molybdenum Cofactor
AXEL MAGALON AND RALF R. MENDEL
From Iron and Cysteine to Iron-Sulfur Clusters: the Biogenesis Protein Machineries
MARC FONTECAVE, BÉATRICE PY, SANDRINE OLLAGNIER
de
CHOUDENS, AND FRÉDÉRIC BARRAS
Lipids
Biosynthesis of Membrane Lipids
JOHN E. CRONAN, JR., AND CHARLES O. ROCK
Copyright
© 2012 ASM Press. All rights reserved.
Contact:
books@asmusa.org
Domain 3 : Metabolism and Metabolic Fluxes